I had this happen last year, and unfortunately I found out too late that the coversheet with the "3" in Place Awarded was right.
...you're talking the bottom of the three big boxes with "2" written in for "Place Awarded", right? NOT a coversheet with "Original Position in Flight: __2__ of __(whatever)__ "
just checking to be sure.
If so, I'd contact Janis and the site director. I suspect each has copies of the flight summary sheets.
Personally, I think when you receive a coversheet that says you advance, you should advance, but I don't make the rules.